QIMR Berghofer

Running Genomic Analyses in the Cloud.

Abstract

Genomic testing is rapidly moving into healthcare practice. However it comes with informatics challenges that the healthcare system has not previously faced - the raw data can be hundreds of gigabytes per test, the compute demands can be thousands of CPU hours, and the test can reveal deeply private health-srelated information that can have implications for anyone related to the person tested. While not a panacea, cloud computing has particular properties that can ameliorate some of these difficulties. This paper presents some of the key lessons learned while deploying a set of genomic analyses on cloud computing for Queensland Genomics.

Authors Leonard, Conrad; Wood, Scott; Holmes, Oliver; Waddell, Nic; Gorse, Dominique; Hansen, David P; Pearson, John V
Journal Studies in Health Technology and Informatics
Pages 149-155
Volume 266
Date 1/08/2019
Grant ID
Funding Body
URL http://www.ncbi.nlm.nih.gov/pubmed/?term=10.3233/SHTI190787